Re: DiscoSnp superseded by DiscoSnp++
On 11/14/2017 10:12 AM, Andreas Tille wrote:
> Hi,
>
> while migrating packages from SVN to Git I stumbled upon discosnp.
> According to its homepage[1] it is superseded by DiscoSnp++. The later
> seems to require gatb-core where packaging has started[2]. This means
> that now two package upgrades would profit from getting gatb-core done.
>
> Assuming that we will manage to finalise gatb-core in the near future
> (Olivier, you might like to talk to upstream regarding droping third
> party code from the upstream source which would simplify the work for
> Nadiya)
what is 3rd party code included ? I can forward to upstream author.
> what would be a sensible course of action: Continuing the
> packaging from discosnp and rename it to discosnp++ or would anybody
> prefer to package discosnp++ from scratch by keeping the old code of
> discosnp as reference for comparison?
>
> Kind regards
>
> Andreas.
>
>
> [1] http://colibread.inria.fr/software/discosnp/
> [2] https://lists.debian.org/debian-med/2017/10/msg00025.html
>
--
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE
Tel: 02.99.84.71.95
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