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Re: cnvkit update to 0.9.6 needs Fwd: python-pomegranate_0.11.1-1_amd64.changes is NEW



Hi Michael,

On Sun, Sep 15, 2019 at 10:41:08PM +0900, Michael Crusoe wrote:
> python-pomegranate was accepted on 2019-08-31, but now we need a source
> only upload
> 
> Steffen, can you do a source only upload of python-pomegranate so cnvkit
> can migrate?

I tried to rebuild but it fails.  Even the dh_auto_clean target.  I added
a ' || true' but this did not helped in the end (so I did not pushed that
hack).  Here is the log:



dh_auto_clean || true
        pybuild --clean --test-nose -i python{version} -p 3.7
I: pybuild base:217: python3.7 setup.py clean 
Traceback (most recent call last):
  File "setup.py", line 61, in <module>
    extensions = cythonize( extensions )
  File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 967, in cythonize
    aliases=aliases)
  File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 812, in create_extension_list
    for file in nonempty(sorted(extended_iglob(filepattern)), "'%s' doesn't match any files" % filepattern):
  File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 111, in nonempty
    raise ValueError(error_msg)
ValueError: 'pomegranate/distributions/*.pyx' doesn't match any files
E: pybuild pybuild:341: clean: plugin distutils failed with: exit code=1: python3.7 setup.py clean 
dh_auto_clean: pybuild --clean --test-nose -i python{version} -p 3.7 returned exit code 13
# cleaning up auto-generated files
find . -name "*.c" -delete
rm -rf .pybuild
make[1]: Leaving directory '/build/python-pomegranate-0.11.1+dfsg'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
        rm -f debian/debhelper-build-stamp
        rm -rf debian/.debhelper/
        rm -f -- debian/python3-pomegranate.substvars debian/python-pomegranate-doc.substvars debian/files
        rm -fr -- debian/python3-pomegranate/ debian/tmp/ debian/python-pomegranate-doc/
        find .  \( \( \
                \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
                \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
                 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
                 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
                 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
                \) -exec rm -f {} + \) -o \
                \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
 dpkg-source -i.git -I.git -b python-pomegranate-0.11.1+dfsg
dpkg-source: info: using options from python-pomegranate-0.11.1+dfsg/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building python-pomegranate using existing ./python-pomegranate_0.11.1+dfsg.orig.tar.xz
Useless use of concatenation (.) or string in void context at /usr/share/perl5/Dpkg/Vendor/Ubuntu.pm line 143.
dpkg-source: info: building python-pomegranate in python-pomegranate_0.11.1+dfsg-1.debian.tar.xz
dpkg-source: info: building python-pomegranate in python-pomegranate_0.11.1+dfsg-1.dsc
 debian/rules build
dh build --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
        pybuild --configure --test-nose -i python{version} -p 3.7
I: pybuild base:217: python3.7 setup.py config 
Traceback (most recent call last):
  File "setup.py", line 61, in <module>
    extensions = cythonize( extensions )
  File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 967, in cythonize
    aliases=aliases)
  File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 812, in create_extension_list
    for file in nonempty(sorted(extended_iglob(filepattern)), "'%s' doesn't match any files" % filepattern):
  File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 111, in nonempty
    raise ValueError(error_msg)
ValueError: 'pomegranate/distributions/*.pyx' doesn't match any files
E: pybuild pybuild:341: configure: plugin distutils failed with: exit code=1: python3.7 setup.py config 
dh_auto_configure: pybuild --configure --test-nose -i python{version} -p 3.7 returned exit code 13
make: *** [debian/rules:8: build] Error 255


Any idea how to fix this?

Kind regards

       Andreas.

-- 
http://fam-tille.de


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