Re: Build issues for new version of bcftools

[Steffen Möller <steffen_moeller@gmx.de>]

You need an update of

https://github.com/samtools/htslib/search?q=BCF_SR_ALLOW_NO_IDX

see

https://github.com/samtools/htslib/pull/1089

Best,

Steffen

On 01.10.20 13:44, Andreas Tille wrote:
> Hi,
>
> I updated bcftools in Git but when trying to build I get
>
> ...
> vcfmerge.c: In function 'main_vcfmerge':
> vcfmerge.c:3213:36: error: 'BCF_SR_ALLOW_NO_IDX' undeclared (first use in this function)
>  3213 |         bcf_sr_set_opt(args->files,BCF_SR_ALLOW_NO_IDX);
>       |                                    ^~~~~~~~~~~~~~~~~~~
> vcfmerge.c:3213:36: note: each undeclared identifier is reported only once for each function it appears in
>
>
> Any volunteer to tackle this?
>
> Kind regards
>
>       Andreas.
>
>