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Bug#925875: marked as done (ITP: bbmap -- short read aligner and other bioinformatic tools)

Your message dated Thu, 08 Aug 2019 19:00:11 +0000
with message-id <E1hvndz-0004rB-PD@fasolo.debian.org>
and subject line Bug#925875: fixed in bbmap 38.43+dfsg-1
has caused the Debian Bug report #925875,
regarding ITP: bbmap -- short read aligner and other bioinformatic tools
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
925875: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=925875
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: bbmap -- short read aligner and other bioinformatic tools
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : bbmap
  Version         : 38.43
  Upstream Author : Brian Bushnell, Jon Rood
* URL             : https://sourceforge.net/projects/bbmap/
* License         : BSD-3-clause
  Programming Lang: C
  Description     : short read aligner and other bioinformatic tools
 BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling
 arbitrarily large genomes with millions of scaffolds. Handles Illumina,
 PacBio, 454, and other reads; very high sensitivity and tolerant of
 errors and numerous large indels.
 .
 BBMap is multithreaded as well as the other tools bundled into this
 package for instance:
 .
 BBNorm: Kmer-based error-correction and normalization tool.
 .
 Dedupe: Simplifies assemblies by removing duplicate or contained
 subsequences that share a target percent identity.
 .
 Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam,
 interleaved/paired, and ASCII-33/64, at over 500 MB/s.
 .
 BBDuk: Filters, trims, or masks reads with kmer matches to an
 artifact/contaminant file.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/bbmap

--- End Message ---
--- Begin Message --- 
Source: bbmap
Source-Version: 38.43+dfsg-1

We believe that the bug you reported is fixed in the latest version of
bbmap, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 925875@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated bbmap package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Wed, 27 Mar 2019 21:58:48 +0100
Source: bbmap
Binary: bbmap bbmap-jni
Architecture: source amd64 all
Version: 38.43+dfsg-1
Distribution: experimental
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 bbmap      - short read aligner and other bioinformatic tools
 bbmap-jni  - short read aligner and other bioinformatic tools - JNI library
Closes: 925875
Changes:
 bbmap (38.43+dfsg-1) experimental; urgency=medium
 .
   * Initial release (Closes: #925875)
Checksums-Sha1:
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 1be7b68c6ed3b541f1c59750cc0a4405da5cc574 12040 bbmap_38.43+dfsg-1_amd64.buildinfo
Checksums-Sha256:
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Files:
 7ca6a9b86cb97edaef79274e64810232 2046 science optional bbmap_38.43+dfsg-1.dsc
 152bb1afd8ea00e80284f78e6dd98eb0 5829656 science optional bbmap_38.43+dfsg.orig.tar.xz
 c224f1621c846514d93b5f6acff15e7f 22420 science optional bbmap_38.43+dfsg-1.debian.tar.xz
 6770c47c43e62571ea5abd841cd9b965 59916 debug optional bbmap-jni-dbgsym_38.43+dfsg-1_amd64.deb
 02ab3ea191182d5bf24af4e5645fa4c1 119206 science optional bbmap-jni_38.43+dfsg-1_amd64.deb
 9ba8bbf7c5f73c9c3e6c7ef702044ebc 4772994 science optional bbmap_38.43+dfsg-1_all.deb
 51072eafbe99a7728f49f067ab50093e 12040 science optional bbmap_38.43+dfsg-1_amd64.buildinfo

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--- End Message ---
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