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Bug#940252: marked as done (ITP: libbio-db-gff-perl -- Storage and retrieval of sequence annotation data)

Your message dated Tue, 15 Oct 2019 07:00:13 +0000
with message-id <E1iKGoX-000DzD-9y@fasolo.debian.org>
and subject line Bug#940252: fixed in libbio-db-gff-perl 1.7.3-1
has caused the Debian Bug report #940252,
regarding ITP: libbio-db-gff-perl -- Storage and retrieval of sequence annotation data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
940252: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=940252
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: libbio-db-gff-perl -- Storage and retrieval of sequence annotation data
Package: wnpp
Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
Severity: wishlist

* Package name    : libbio-db-gff-perl
  Version         : 1.7.3
  Upstream Author : Copyright: (c) 2001-2003, 2005, 2008 Cold Spring Harbor Laboratory
* URL             : https://metacpan.org/release/Bio-DB-GFF
* License         : Artistic
  Programming Lang: Perl
  Description     : Storage and retrieval of sequence annotation data
 Bio::DB::GFF provides fast indexed access to a sequence annotation database.
 It supports multiple database types (ACeDB, relational), and multiple schemas
 through a system of adaptors and aggregators.
 .
 The following operations are supported by this module:
 .
  - retrieving a segment of sequence based on the ID of a landmark
 .
  - retrieving the DNA from that segment
 .
  - finding all annotations that overlap with the segment
 .
  - finding all annotations that are completely contained within the
 segment
 .
  - retrieving all annotations of a particular type, either within a
 segment, or globally
 .
  - conversion from absolute to relative coordinates and back again,
 using any arbitrary landmark for the relative coordinates
 .
  - using a sequence segment to create new segments based on relative
 offsets

Remark: This package is maintained by Michael R. Crusoe at
   https://salsa.debian.org/med-team/libbio-db-gff-perl

--- End Message ---
--- Begin Message --- 
Source: libbio-db-gff-perl
Source-Version: 1.7.3-1

We believe that the bug you reported is fixed in the latest version of
libbio-db-gff-perl, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 940252@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <michael.crusoe@gmail.com> (supplier of updated libbio-db-gff-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


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Hash: SHA256

Format: 1.8
Date: Sat, 14 Sep 2019 16:19:52 +0200
Source: libbio-db-gff-perl
Binary: libbio-db-gff-perl
Architecture: source all
Version: 1.7.3-1
Distribution: unstable
Urgency: low
Maintainer: Michael R. Crusoe <michael.crusoe@gmail.com>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Description:
 libbio-db-gff-perl - Storage and retrieval of sequence annotation data
Closes: 940252
Changes:
 libbio-db-gff-perl (1.7.3-1) unstable; urgency=low
 .
   * Initial release. (Closes: #940252)
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