Bug#991458: ITP: unifrac -- high-performance phylogenetic diversity calculations
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: nilesh@debian.org
Subject: ITP: unifrac -- high-performance phylogenetic diversity calculations
Package: wnpp
Owner: Nilesh Patra <nilesh@debian.org>
Severity: wishlist
* Package name : unifrac
Version : 0.10.0
Upstream Author : , UniFrac development team.
* URL : https://github.com/biocore/unifrac
* License : BSD-3-clause
Programming Lang: C
Description : high-performance phylogenetic diversity calculations
The de facto repository for high-performance phylogenetic diversity
calculations. The methods in this repository are based on an
implementation of the Strided State UniFrac algorithm which is faster,
and uses less memory than Fast UniFrac. Strided State UniFrac supports
Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance
Adjusted UniFrac and meta UniFrac. This repository also includes Stacked
Faith (manuscript in preparation), a method for calculating Faith's PD
that is faster and uses less memory than the Fast UniFrac-based
reference implementation.
.
This package contains the Python3 module.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/unifrac
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