Bug#855891: marked as done (Ignore APT::Get::AutomaticRemove during "upgrade")

To: Julian Andres Klode <jak@debian.org>
Subject: Bug#855891: marked as done (Ignore APT::Get::AutomaticRemove during "upgrade")
From: owner@bugs.debian.org (Debian Bug Tracking System)
Date: Sat, 01 Apr 2017 21:06:06 +0000
Message-id: <[🔎] handler.855891.D855891.14910806296001.ackdone@bugs.debian.org>
References: <E1cuQBW-000Ah4-6d@fasolo.debian.org> <20170222221744.hks3f3ueqfwno3yz@fishbowl.rw.madduck.net>

Your message dated Sat, 01 Apr 2017 21:03:46 +0000
with message-id <E1cuQBW-000Ah4-6d@fasolo.debian.org>
and subject line Bug#855891: fixed in apt 1.4
has caused the Debian Bug report #855891,
regarding Ignore APT::Get::AutomaticRemove during "upgrade"
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
855891: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855891
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems

--- Begin Message ---

To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: upgrade removes packages
From: martin f krafft <madduck@debian.org>
Date: Thu, 23 Feb 2017 11:17:44 +1300
Message-id: <20170222221744.hks3f3ueqfwno3yz@fishbowl.rw.madduck.net>

Package: apt
Version: 1.0.9.8.4
Severity: important

I upgraded a jessie system to stretch last night, using the usual
dpkg --configure -a && dpkg --audit && apt-get upgrade && apt-get
dist-upgrade sequence.

During the upgrade step, ifupdown (among others) was removed:

  Commandline: apt-get upgrade
  […]
  Remove: libuuid-perl:amd64 (0.05-1+b1), ifupdown:amd64
  (0.8.13~bpo8+1), libperl4-corelibs-perl:amd64 (0.003-1),
  python-bson:amd64 (2.7.2-1), libasprintf0c2:amd64 (0.19.3-2),
  python-pymongo:amd64 (2.7.2-1)

I consider this a pretty bad policy violation, but I can't rule out
that I haven't made a mistake, so not making this RC for now… please
feel free to change.

This bug report was composed in reaction to
https://lists.debian.org/msgid-search/20170222121627.qjbhg7bitu4le4b7@crossbow

Please note that the backports.org version was installed, not sure
that's of any relevance though. Unfortunately, I had installed the
backport just shortly before the upgrade, in an attempt to get
a feature (systemd --user) to work on jessie, which required this
upgrade of ifupdown, and there exists no dpkg.status backup with the
backports.org version just before the upgrade.

However, libperl4-corelibs-perl was also removed during the
"upgrade", and that exists in the previous dpkg.status backup:

  Package: libperl4-corelibs-perl
  Status: install ok installed
  Version: 0.003-1

and also in the apt.extended_states backup:

  Package: libperl4-corelibs-perl
  Architecture: amd64
  Auto-Installed: 1

and in the aptitude.pkgstates backup, although aptitude was not used
in any of this:

  Package: libperl4-corelibs-perl
  Architecture: amd64
  Unseen: no
  State: 1
  Dselect-State: 1
  Remove-Reason: 0

> A good idea might also be to write down the result of "grep ^Date
> /var/lib/apt/lists/*Release" somewhere to have an easier time of
> getting the same mirror state out of snapshot if we need that.

debian_dists_jessie_Release:Date: Sat, 14 Jan 2017 11:03:32 UTC
debian-security_dists_jessie_updates_InRelease:Date: Mon, 20 Feb 2017 19:21:05 UTC
debian_dists_jessie-updates_InRelease:Date: Tue, 21 Feb 2017 14:31:12 UTC
debian_dists_jessie-backports_InRelease:Date: Tue, 21 Feb 2017 14:31:12 UTC

> I would suggest to report a bug with all the details you collected
> [and all those the bugscript wants to collect] as its hard to
> reproduce otherwise

Here's the bugscript output, though run (manually) after the stretch upgrade of
course:

-- apt-config dump --

APT "";
APT::Architecture "amd64";
APT::Build-Essential "";
APT::Build-Essential:: "build-essential";
APT::Install-Recommends "false";
APT::Install-Suggests "0";
APT::Sandbox "";
APT::Sandbox::User "_apt";
APT::NeverAutoRemove "";
APT::NeverAutoRemove:: "^firmware-linux.*";
APT::NeverAutoRemove:: "^linux-firmware$";
APT::NeverAutoRemove:: "^linux-image-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^linux-image-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^linux-headers-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^linux-headers-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^linux-image-extra-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^linux-image-extra-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^linux-signed-image-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^linux-signed-image-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^kfreebsd-image-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^kfreebsd-image-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^kfreebsd-headers-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^kfreebsd-headers-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^gnumach-image-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^gnumach-image-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^.*-modules-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^.*-modules-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^.*-kernel-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^.*-kernel-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^linux-backports-modules-.*-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^linux-backports-modules-.*-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^linux-tools-3\.16\.0-4-amd64$";
APT::NeverAutoRemove:: "^linux-tools-4\.9\.0-1-amd64$";
APT::NeverAutoRemove:: "^postgresql-";
APT::VersionedKernelPackages "";
APT::VersionedKernelPackages:: "linux-image";
APT::VersionedKernelPackages:: "linux-headers";
APT::VersionedKernelPackages:: "linux-image-extra";
APT::VersionedKernelPackages:: "linux-signed-image";
APT::VersionedKernelPackages:: "kfreebsd-image";
APT::VersionedKernelPackages:: "kfreebsd-headers";
APT::VersionedKernelPackages:: "gnumach-image";
APT::VersionedKernelPackages:: ".*-modules";
APT::VersionedKernelPackages:: ".*-kernel";
APT::VersionedKernelPackages:: "linux-backports-modules-.*";
APT::VersionedKernelPackages:: "linux-tools";
APT::Never-MarkAuto-Sections "";
APT::Never-MarkAuto-Sections:: "metapackages";
APT::Never-MarkAuto-Sections:: "contrib/metapackages";
APT::Never-MarkAuto-Sections:: "non-free/metapackages";
APT::Never-MarkAuto-Sections:: "restricted/metapackages";
APT::Never-MarkAuto-Sections:: "universe/metapackages";
APT::Never-MarkAuto-Sections:: "multiverse/metapackages";
APT::Move-Autobit-Sections "";
APT::Move-Autobit-Sections:: "oldlibs";
APT::Move-Autobit-Sections:: "contrib/oldlibs";
APT::Move-Autobit-Sections:: "non-free/oldlibs";
APT::Move-Autobit-Sections:: "restricted/oldlibs";
APT::Move-Autobit-Sections:: "universe/oldlibs";
APT::Move-Autobit-Sections:: "multiverse/oldlibs";
APT::Get "";
APT::Get::Purge "false";
APT::Get::AutomaticRemove "true";
APT::Architectures "";
APT::Architectures:: "amd64";
APT::Compressor "";
APT::Compressor::. "";
APT::Compressor::.::Name ".";
APT::Compressor::.::Extension "";
APT::Compressor::.::Binary "";
APT::Compressor::.::Cost "0";
APT::Compressor::lz4 "";
APT::Compressor::lz4::Name "lz4";
APT::Compressor::lz4::Extension ".lz4";
APT::Compressor::lz4::Binary "false";
APT::Compressor::lz4::Cost "50";
APT::Compressor::gzip "";
APT::Compressor::gzip::Name "gzip";
APT::Compressor::gzip::Extension ".gz";
APT::Compressor::gzip::Binary "gzip";
APT::Compressor::gzip::Cost "100";
APT::Compressor::gzip::CompressArg "";
APT::Compressor::gzip::CompressArg:: "-6n";
APT::Compressor::gzip::UncompressArg "";
APT::Compressor::gzip::UncompressArg:: "-d";
APT::Compressor::xz "";
APT::Compressor::xz::Name "xz";
APT::Compressor::xz::Extension ".xz";
APT::Compressor::xz::Binary "xz";
APT::Compressor::xz::Cost "200";
APT::Compressor::xz::CompressArg "";
APT::Compressor::xz::CompressArg:: "-6";
APT::Compressor::xz::UncompressArg "";
APT::Compressor::xz::UncompressArg:: "-d";
APT::Compressor::bzip2 "";
APT::Compressor::bzip2::Name "bzip2";
APT::Compressor::bzip2::Extension ".bz2";
APT::Compressor::bzip2::Binary "bzip2";
APT::Compressor::bzip2::Cost "300";
APT::Compressor::bzip2::CompressArg "";
APT::Compressor::bzip2::CompressArg:: "-6";
APT::Compressor::bzip2::UncompressArg "";
APT::Compressor::bzip2::UncompressArg:: "-d";
APT::Compressor::lzma "";
APT::Compressor::lzma::Name "lzma";
APT::Compressor::lzma::Extension ".lzma";
APT::Compressor::lzma::Binary "xz";
APT::Compressor::lzma::Cost "400";
APT::Compressor::lzma::CompressArg "";
APT::Compressor::lzma::CompressArg:: "--format=lzma";
APT::Compressor::lzma::CompressArg:: "-6";
APT::Compressor::lzma::UncompressArg "";
APT::Compressor::lzma::UncompressArg:: "--format=lzma";
APT::Compressor::lzma::UncompressArg:: "-d";
Dir "/";
Dir::State "var/lib/apt";
Dir::State::lists "lists/";
Dir::State::cdroms "cdroms.list";
Dir::State::mirrors "mirrors/";
Dir::State::extended_states "extended_states";
Dir::State::status "/var/lib/dpkg/status";
Dir::Cache "var/cache/apt";
Dir::Cache::archives "archives/";
Dir::Cache::srcpkgcache "srcpkgcache.bin";
Dir::Cache::pkgcache "pkgcache.bin";
Dir::Etc "etc/apt";
Dir::Etc::sourcelist "sources.list";
Dir::Etc::sourceparts "sources.list.d";
Dir::Etc::main "apt.conf";
Dir::Etc::netrc "auth.conf";
Dir::Etc::parts "apt.conf.d";
Dir::Etc::preferences "preferences";
Dir::Etc::preferencesparts "preferences.d";
Dir::Etc::trusted "trusted.gpg";
Dir::Etc::trustedparts "trusted.gpg.d";
Dir::Bin "";
Dir::Bin::methods "/usr/lib/apt/methods";
Dir::Bin::solvers "";
Dir::Bin::solvers:: "/usr/lib/apt/solvers";
Dir::Bin::planners "";
Dir::Bin::planners:: "/usr/lib/apt/planners";
Dir::Bin::dpkg "/usr/bin/dpkg";
Dir::Bin::gzip "/bin/gzip";
Dir::Bin::bzip2 "/bin/bzip2";
Dir::Bin::xz "/usr/bin/xz";
Dir::Bin::lz4 "/usr/bin/lz4";
Dir::Bin::lzma "/usr/bin/xz";
Dir::Media "";
Dir::Media::MountPath "/media/apt";
Dir::Log "var/log/apt";
Dir::Log::Terminal "term.log";
Dir::Log::History "history.log";
Dir::Log::Planner "eipp.log.xz";
Dir::Ignore-Files-Silently "";
Dir::Ignore-Files-Silently:: "~$";
Dir::Ignore-Files-Silently:: "\.disabled$";
Dir::Ignore-Files-Silently:: "\.bak$";
Dir::Ignore-Files-Silently:: "\.dpkg-[a-z]+$";
Dir::Ignore-Files-Silently:: "\.save$";
Dir::Ignore-Files-Silently:: "\.orig$";
Dir::Ignore-Files-Silently:: "\.distUpgrade$";
Acquire "";
Acquire::AllowInsecureRepositories "0";
Acquire::AllowWeakRepositories "0";
Acquire::AllowDowngradeToInsecureRepositories "0";
Acquire::cdrom "";
Acquire::cdrom::mount "/media/cdrom/";
Acquire::IndexTargets "";
Acquire::IndexTargets::deb "";
Acquire::IndexTargets::deb::Packages "";
Acquire::IndexTargets::deb::Packages::MetaKey "$(COMPONENT)/binary-$(ARCHITECTURE)/Packages";
Acquire::IndexTargets::deb::Packages::flatMetaKey "Packages";
Acquire::IndexTargets::deb::Packages::ShortDescription "Packages";
Acquire::IndexTargets::deb::Packages::Description "$(RELEASE)/$(COMPONENT) $(ARCHITECTURE) Packages";
Acquire::IndexTargets::deb::Packages::flatDescription "$(RELEASE) Packages";
Acquire::IndexTargets::deb::Packages::Optional "0";
Acquire::IndexTargets::deb::Translations "";
Acquire::IndexTargets::deb::Translations::MetaKey "$(COMPONENT)/i18n/Translation-$(LANGUAGE)";
Acquire::IndexTargets::deb::Translations::flatMetaKey "$(LANGUAGE)";
Acquire::IndexTargets::deb::Translations::ShortDescription "Translation-$(LANGUAGE)";
Acquire::IndexTargets::deb::Translations::Description "$(RELEASE)/$(COMPONENT) Translation-$(LANGUAGE)";
Acquire::IndexTargets::deb::Translations::flatDescription "$(RELEASE) Translation-$(LANGUAGE)";
Acquire::IndexTargets::deb-src "";
Acquire::IndexTargets::deb-src::Sources "";
Acquire::IndexTargets::deb-src::Sources::MetaKey "$(COMPONENT)/source/Sources";
Acquire::IndexTargets::deb-src::Sources::flatMetaKey "Sources";
Acquire::IndexTargets::deb-src::Sources::ShortDescription "Sources";
Acquire::IndexTargets::deb-src::Sources::Description "$(RELEASE)/$(COMPONENT) Sources";
Acquire::IndexTargets::deb-src::Sources::flatDescription "$(RELEASE) Sources";
Acquire::IndexTargets::deb-src::Sources::Optional "0";
Acquire::Changelogs "";
Acquire::Changelogs::URI "";
Acquire::Changelogs::URI::Origin "";
Acquire::Changelogs::URI::Origin::Debian "http://metadata.ftp-master.debian.org/changelogs/@CHANGEPATH@_changelog";;
Acquire::Changelogs::URI::Origin::Tanglu "http://metadata.tanglu.org/changelogs/@CHANGEPATH@_changelog";;
Acquire::Changelogs::URI::Origin::Ubuntu "http://changelogs.ubuntu.com/changelogs/pool/@CHANGEPATH@/changelog";;
Acquire::Changelogs::URI::Origin::Ultimedia "http://packages.ultimediaos.com/changelogs/pool/@CHANGEPATH@/changelog.txt";;
Acquire::Changelogs::AlwaysOnline "";
Acquire::Changelogs::AlwaysOnline::Origin "";
Acquire::Changelogs::AlwaysOnline::Origin::Ubuntu "1";
Acquire::PDiffs "false";
Acquire::Languages "";
Acquire::Languages:: "en_NZ";
Acquire::Languages:: "en";
Acquire::Languages:: "none";
Acquire::CompressionTypes "";
Acquire::CompressionTypes::xz "xz";
Acquire::CompressionTypes::bz2 "bzip2";
Acquire::CompressionTypes::lzma "lzma";
Acquire::CompressionTypes::gz "gzip";
Acquire::CompressionTypes::lz4 "lz4";
DPkg "";
DPkg::Pre-Install-Pkgs "";
DPkg::Pre-Install-Pkgs:: "/usr/bin/apt-listchanges --apt || test $? -lt 10";
DPkg::Pre-Install-Pkgs:: "/usr/sbin/dpkg-preconfigure --apt || true";
DPkg::Tools "";
DPkg::Tools::Options "";
DPkg::Tools::Options::/usr/bin/apt-listchanges "";
DPkg::Tools::Options::/usr/bin/apt-listchanges::Version "2";
DPkg::Tools::Options::/usr/bin/apt-listchanges::InfoFD "20";
Binary "apt-config";
Binary::apt "";
Binary::apt::APT "";
Binary::apt::APT::Color "1";
Binary::apt::APT::Cache "";
Binary::apt::APT::Cache::Show "";
Binary::apt::APT::Cache::Show::Version "2";
Binary::apt::APT::Cache::AllVersions "0";
Binary::apt::APT::Cache::ShowVirtuals "1";
Binary::apt::APT::Cache::Search "";
Binary::apt::APT::Cache::Search::Version "2";
Binary::apt::APT::Cache::ShowDependencyType "1";
Binary::apt::APT::Cache::ShowVersion "1";
Binary::apt::APT::Get "";
Binary::apt::APT::Get::Upgrade-Allow-New "1";
Binary::apt::APT::Cmd "";
Binary::apt::APT::Cmd::Show-Update-Stats "1";
Binary::apt::APT::Keep-Downloaded-Packages "0";
Binary::apt::DPkg "";
Binary::apt::DPkg::Progress-Fancy "1";
Binary::apt-get "";
Binary::apt-get::Acquire "";
Binary::apt-get::Acquire::AllowInsecureRepositories "1";
CommandLine "";
CommandLine::AsString "apt-config dump";

-- (no /etc/apt/preferences present) --


-- (no /etc/apt/preferences.d/* present) --


-- /etc/apt/sources.list --

# Ansible managed: /home/madduck/sa/ansible/playbooks/apt/sourceslist.j2 modified
# on 2015-11-25 14:46:25 by madduck on fishbowl
#
# Put local repository definitions into /etc/apt/sources.list.d/local-*
#

# repository: debian
deb     http://ftp.uni-erlangen.de/debian stretch main

# repository: debian-security
deb     http://security.debian.org/debian-security stretch/updates main

# repository: madduck
deb     http://debian.madduck.net/repo stretch main

-- 
 .''`.   martin f. krafft <madduck@d.o> @martinkrafft
: :'  :  proud Debian developer
`. `'`   http://people.debian.org/~madduck
  `-  Debian - when you have better things to do than fixing systems

Attachment: digital_signature_gpg.asc
Description: Digital GPG signature (see http://martin-krafft.net/gpg/sig-policy/999bbcc4/current)

--- End Message ---

--- Begin Message ---

To: 855891-close@bugs.debian.org
Subject: Bug#855891: fixed in apt 1.4
From: Julian Andres Klode <jak@debian.org>
Date: Sat, 01 Apr 2017 21:03:46 +0000
Message-id: <E1cuQBW-000Ah4-6d@fasolo.debian.org>

Source: apt
Source-Version: 1.4

We believe that the bug you reported is fixed in the latest version of
apt, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855891@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Julian Andres Klode <jak@debian.org> (supplier of updated apt package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sat, 01 Apr 2017 21:39:37 +0200
Source: apt
Binary: apt libapt-pkg5.0 libapt-inst2.0 apt-doc libapt-pkg-dev libapt-pkg-doc apt-utils apt-transport-https
Architecture: source
Version: 1.4
Distribution: unstable
Urgency: medium
Maintainer: APT Development Team <deity@lists.debian.org>
Changed-By: Julian Andres Klode <jak@debian.org>
Description:
 apt        - commandline package manager
 apt-doc    - documentation for APT
 apt-transport-https - https download transport for APT
 apt-utils  - package management related utility programs
 libapt-inst2.0 - deb package format runtime library
 libapt-pkg-dev - development files for APT's libapt-pkg and libapt-inst
 libapt-pkg-doc - documentation for APT development
 libapt-pkg5.0 - package management runtime library
Closes: 855891 856723 857632
Changes:
 apt (1.4) unstable; urgency=medium
 .
   * The April Fools' Release
 .
   [ Julian Andres Klode ]
   * Ignore \.ucf-[a-z]+$ like we do for \.dpkg-[a-z]+$
   * Fix mistake in CHANGEPATH comment example
 .
   [ Chris Lamb ]
   * auto-removal: Ignore running kernel if attempting a reproducible build
     (Closes: #857632)
 .
   [ Joe Dalton ]
   * Danish program translation update (Closes: #856723)
 .
   [ David Kalnischkies ]
   * Fix and avoid quoting in CommandLine::AsString (LP: #1672710)
   * Ignore AutomaticRemove conffile option in upgrade (Closes: #855891)
Checksums-Sha1:
 e7daf021089f462a0a9851f80ae47b3c41cf9f97 2541 apt_1.4.dsc
 a1cf3b4d45b5140317954634984bc7582db54451 2076104 apt_1.4.tar.xz
 8e1d40b242228cebeaffd4248d2732cbbda10554 7556 apt_1.4_source.buildinfo
Checksums-Sha256:
 ae69ca34d14062b676e005de2415de2236c0b38c03496675d86f5ee725a3fcaa 2541 apt_1.4.dsc
 933cc255e7d053d93a08ccd0e027d762a8a621e4f2ec0977b0b326893da163fc 2076104 apt_1.4.tar.xz
 906fd4ca179f7b3b1d4185d58be0cfd5631065c6395b954a37e73366efb3dfb6 7556 apt_1.4_source.buildinfo
Files:
 a5678f4c8852537ba7aeefdfae72e2d9 2541 admin important apt_1.4.dsc
 10042b4b910056a15c3357d7ed8d0acd 2076104 admin important apt_1.4.tar.xz
 dbd171682fca7d92fa318a1b32a5461e 7556 admin important apt_1.4_source.buildinfo

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--- End Message ---

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