Package: murasaki-mpi (1.68.6-13 and others)
Links for murasaki-mpi
Debian Resources:
Download Source Package murasaki:
- [murasaki_1.68.6-13.dsc]
- [murasaki_1.68.6.orig-debian-tests-data.tar.gz]
- [murasaki_1.68.6.orig.tar.gz]
- [murasaki_1.68.6-13.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [murasaki.dna.bio.keio.ac.jp]
Similar packages:
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.
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Download murasaki-mpi
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 1.68.6-13+b5 | 694.7 kB | 5,701.0 kB | [list of files] |
amd64 | 1.68.6-13+b5 | 725.1 kB | 5,095.0 kB | [list of files] |
arm64 | 1.68.6-13+b5 | 630.7 kB | 5,159.0 kB | [list of files] |
armel | 1.68.6-13+b5 | 481.5 kB | 3,423.0 kB | [list of files] |
armhf | 1.68.6-13+b5 | 495.5 kB | 2,415.0 kB | [list of files] |
hppa (unofficial port) | 1.68.6-13+b5 | 698.5 kB | 4,822.0 kB | [list of files] |
i386 | 1.68.6-13+b5 | 737.6 kB | 4,803.0 kB | [list of files] |
ia64 (unofficial port) | 1.68.6-13+b5 | 766.7 kB | 9,658.0 kB | [list of files] |
m68k (unofficial port) | 1.68.6-13+b5 | 590.5 kB | 4,246.0 kB | [list of files] |
mips64el | 1.68.6-13+b5 | 688.8 kB | 6,877.0 kB | [list of files] |
ppc64 (unofficial port) | 1.68.6-13+b5 | 715.8 kB | 7,143.0 kB | [list of files] |
ppc64el | 1.68.6-13+b4 | 719.3 kB | 6,503.0 kB | [list of files] |
riscv64 | 1.68.6-13+b3 | 676.6 kB | 3,970.0 kB | [list of files] |
s390x | 1.68.6-13+b4 | 707.7 kB | 5,742.0 kB | [list of files] |
sh4 (unofficial port) | 1.68.6-13+b4 | 614.4 kB | 4,250.0 kB | [list of files] |
sparc64 (unofficial port) | 1.68.6-11 | 517.7 kB | 3,959.0 kB | [list of files] |
x32 (unofficial port) | 1.68.6-13+b5 | 583.0 kB | 3,388.0 kB | [list of files] |