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[ Source: uc-echo  ]

Package: uc-echo (1.12-19 and others)

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error correction algorithm designed for short-reads from NGS

ECHO is an error correction algorithm designed for short-reads from next-generation sequencing platforms such as Illumina's Genome Analyzer II. The algorithm uses a Bayesian framework to improve the quality of the reads in a given data set by employing maximum a posteriori estimation.

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Download uc-echo

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.12-19 71.1 kB470.0 kB [list of files]
amd64 1.12-19 76.9 kB361.0 kB [list of files]
arm64 1.12-19 68.1 kB469.0 kB [list of files]
armel 1.12-19 69.0 kB307.0 kB [list of files]
armhf 1.12-19 67.9 kB239.0 kB [list of files]
hppa (unofficial port) 1.12-19 78.4 kB344.0 kB [list of files]
i386 1.12-19 75.6 kB339.0 kB [list of files]
ia64 (unofficial port) 1.12-18 88.5 kB526.0 kB [list of files]
m68k (unofficial port) 1.12-19 72.6 kB319.0 kB [list of files]
mips64el 1.12-19 73.2 kB482.0 kB [list of files]
ppc64 (unofficial port) 1.12-19 75.5 kB533.0 kB [list of files]
ppc64el 1.12-19 75.7 kB533.0 kB [list of files]
riscv64 1.12-19 74.3 kB277.0 kB [list of files]
s390x 1.12-19 76.5 kB333.0 kB [list of files]
sh4 (unofficial port) 1.12-19 87.6 kB464.0 kB [list of files]
sparc64 (unofficial port) 1.12-19 67.4 kB6,242.0 kB [list of files]
x32 (unofficial port) 1.12-16 74.9 kB327.0 kB [list of files]