[ Source: spoa ]
Package: spoa (4.0.8-1)
Links for spoa
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Download Source Package spoa:
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External Resources:
- Homepage [github.com]
Similar packages:
SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).
Other Packages Related to spoa
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [not armel, armhf]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libspoa7.0.0 (>= 4.0.5) [amd64]
- SIMD partial order alignment library
- dep: libspoa7.0.0 (>= 4.0.8) [not amd64]
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download spoa
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 35.2 kB | 74.0 kB | [list of files] |
| arm64 | 34.2 kB | 98.0 kB | [list of files] |
| armel | 33.1 kB | 97.0 kB | [list of files] |
| armhf | 32.6 kB | 97.0 kB | [list of files] |
| i386 | 35.6 kB | 73.0 kB | [list of files] |
| mips64el | 34.8 kB | 100.0 kB | [list of files] |
| mipsel | 34.7 kB | 99.0 kB | [list of files] |
| ppc64el | 36.0 kB | 98.0 kB | [list of files] |
| s390x | 34.2 kB | 74.0 kB | [list of files] |